Well, I have drained my pool and started over. Its been 3 weeks or so and I still have concerns over my CL level.
I seem to have high Total CL, and very low Free CL. I use 6% walmart bleach to chlorinate.
Latest readings:

Free CL: .12
TotalCL: 2.95
pH: 7.5
ALk: 157
Cya: 8

Should I be concerned about the difference between Free and Total CL levels?