If the pump can be wired correctly to be compatible with the generator then I see no reason for any safety issues. Other then the obvious, lots of water and electricity near each other.
If your converting a "hardwired" pump over to a plug type set up to be used in conjunction with the generator, be careful the length of powercord you use. I once temped a pool pump from a house outlet like this and the extension cord got very hot, but it was a very long run. Some one with more electrical savvy can probably explain why.
Then again, I wouldn't want to have the generator right near all the pumps and other stuff either. A little distance probably isn't a bad thing.
But I don't see why if the generator is of sufficient power, and the pump is wired correctly to receive it, that it shouldn't be like running anything else off a generator. Problem is pool pumps draw a lot more power then most any household item or lights you'd use with a generator.
If your not familiar with either generators, the pump itself, and electricity, I wouldn't go fooling around trying to rewire it.
But if the pump plugs into an outlet right now, it's simply finding a generator with the same plug and sufficient power. Of course there's probably going to be no way of regulating it, other then turning the generator off and on, or plugging and unplugging the pump (if there are other items running off the generator). Most generators have something that looks like a wall socket on them. You just can't overwhelm them by plugging things in that are too much for it to power.
Sorry I can't be of more help, when ever I encountered these things while in business, I'd chirp my electrician on the Nextell 2-way, and he'd walk me through it.
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